java.lang.Object

jspecview.application.JSpecView

All Implemented Interfaces:: ScriptInterface, JSVInterface

public class JSpecView extends Object implements JSVInterface, ScriptInterface

The Main Class or Entry point of the JSpecView Application.

Author:: Debbie-Ann Facey, Khari A. Bryan, Prof Robert J. Lancashire, Bob Hanson St. Olaf College hansonr@stolaf.edu

Field Summary

Fields

Modifier and Type

Field

Description

String

defaultDisplaySchemeName

JmolSyncInterface

jmol
Constructor Summary

Constructors

Constructor

Description

JSpecView(boolean hasDisplay, JSVInterface jmol)
Method Summary

Modifier and Type

Method

Description

void

exitJSpecView(boolean withDialog, Object frame)

DisplaySchemesProcessor

getDisplaySchemesProcessor(JSVInterface jmolOrAdvancedApplet)

boolean

isSigned()

static void

main(String[] args)

void

repaint()

void

runScript(String script)

for the applet, this is queued

boolean

runScriptNow(String script)

void

saveProperties(Properties properties)

void

setApplicationProperties(boolean shouldApplySpectrumDisplaySettings)

void

setCursor(int id)

void

setMainFrame(MainFrame mainFrame)

void

setProperties(Properties properties)

void

siCheckCallbacks(String title)

void

siExecHidden(boolean b)

void

siExecScriptComplete(String msg, boolean isOK)

void

siExecSetCallback(ScriptToken st, String value)

void

siExecTest(String value)

JSVPanel

siGetNewJSVPanel(Spectrum spec)

JSVPanel

siGetNewJSVPanel2(Lst<Spectrum> specs)

String

siLoaded(String value)

void

siNewWindow(boolean isSelected, boolean fromFrame)

void

siNodeSet(PanelNode panelNode)

void

siOpenDataOrFile(Object data, String name, Lst<Spectrum> specs, String url, int firstSpec, int lastSpec, boolean isAppend, String script, String id)

void

siProcessCommand(String script)

void

siSendPanelChange()

void

siSetCurrentSource(JDXSource source)

void

siSetLoaded(String fileName, String filePath)

void

siSetMenuEnables(PanelNode node, boolean isSplit)

void

siSetPropertiesFromPreferences(JSVPanel jsvp, boolean includeMeasures)

Sets the display properties as specified from the preferences dialog or the properties file

void

siSetSelectedPanel(JSVPanel jsvp)

void

siSourceClosed(JDXSource source)

Closes the JDXSource specified by source

void

siSyncLoad(String filePath)

void

siUpdateBoolean(ScriptToken st, boolean TF)

void

siUpdateRecentMenus(String filePath)

void

siValidateAndRepaint(boolean isAll)

void

syncToJmol(String msg)

void

writeStatus(String msg)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details
- defaultDisplaySchemeName
  
  public String defaultDisplaySchemeName
- jmol
  
  public JmolSyncInterface jmol
Constructor Details
- JSpecView
  
  public JSpecView(boolean hasDisplay, JSVInterface jmol)
Method Details
- setMainFrame
  
  public void setMainFrame(MainFrame mainFrame)
- main
  
  public static void main(String[] args)
- runScript
  
  public void runScript(String script)
  
  for the applet, this is queued
  
  Specified by:
  
  runScript in interface JSVInterface
  
  Specified by:
  
  runScript in interface ScriptInterface
- setProperties
  
  public void setProperties(Properties properties)
  
  Specified by:
  
  setProperties in interface JSVInterface
- saveProperties
  
  public void saveProperties(Properties properties)
  
  Specified by:
  
  saveProperties in interface JSVInterface
- exitJSpecView
  
  public void exitJSpecView(boolean withDialog, Object frame)
  
  Specified by:
  
  exitJSpecView in interface JSVInterface
- siOpenDataOrFile
  
  public void siOpenDataOrFile(Object data, String name, Lst<Spectrum> specs, String url, int firstSpec, int lastSpec, boolean isAppend, String script, String id)
  
  Specified by:
  
  siOpenDataOrFile in interface ScriptInterface
- siSetCurrentSource
  
  public void siSetCurrentSource(JDXSource source)
  
  Specified by:
  
  siSetCurrentSource in interface ScriptInterface
- siSetPropertiesFromPreferences
  
  public void siSetPropertiesFromPreferences(JSVPanel jsvp, boolean includeMeasures)
  
  Sets the display properties as specified from the preferences dialog or the properties file
  
  Specified by:
  
  siSetPropertiesFromPreferences in interface ScriptInterface
  
  Parameters:
  
  jsvp - the display panel
- siProcessCommand
  
  public void siProcessCommand(String script)
  
  Specified by:
  
  siProcessCommand in interface ScriptInterface
- siSetSelectedPanel
  
  public void siSetSelectedPanel(JSVPanel jsvp)
  
  Specified by:
  
  siSetSelectedPanel in interface ScriptInterface
- siSendPanelChange
  
  public void siSendPanelChange()
  
  Specified by:
  
  siSendPanelChange in interface ScriptInterface
- siSyncLoad
  
  public void siSyncLoad(String filePath)
  
  Specified by:
  
  siSyncLoad in interface ScriptInterface
- siValidateAndRepaint
  
  public void siValidateAndRepaint(boolean isAll)
  
  Specified by:
  
  siValidateAndRepaint in interface ScriptInterface
- siExecHidden
  
  public void siExecHidden(boolean b)
  
  Specified by:
  
  siExecHidden in interface ScriptInterface
- siLoaded
  
  public String siLoaded(String value)
  
  Specified by:
  
  siLoaded in interface ScriptInterface
- siExecScriptComplete
  
  public void siExecScriptComplete(String msg, boolean isOK)
  
  Specified by:
  
  siExecScriptComplete in interface ScriptInterface
- siExecSetCallback
  
  public void siExecSetCallback(ScriptToken st, String value)
  
  Specified by:
  
  siExecSetCallback in interface ScriptInterface
- siUpdateBoolean
  
  public void siUpdateBoolean(ScriptToken st, boolean TF)
  
  Specified by:
  
  siUpdateBoolean in interface ScriptInterface
- siCheckCallbacks
  
  public void siCheckCallbacks(String title)
  
  Specified by:
  
  siCheckCallbacks in interface ScriptInterface
- siNodeSet
  
  public void siNodeSet(PanelNode panelNode)
  
  Specified by:
  
  siNodeSet in interface ScriptInterface
- siSourceClosed
  
  public void siSourceClosed(JDXSource source)
  
  Closes the JDXSource specified by source
  
  Specified by:
  
  siSourceClosed in interface ScriptInterface
  
  Parameters:
  
  source - the JDXSource
- siSetLoaded
  
  public void siSetLoaded(String fileName, String filePath)
  
  Specified by:
  
  siSetLoaded in interface ScriptInterface
- siUpdateRecentMenus
  
  public void siUpdateRecentMenus(String filePath)
  
  Specified by:
  
  siUpdateRecentMenus in interface ScriptInterface
- siSetMenuEnables
  
  public void siSetMenuEnables(PanelNode node, boolean isSplit)
  
  Specified by:
  
  siSetMenuEnables in interface ScriptInterface
- siGetNewJSVPanel
  
  public JSVPanel siGetNewJSVPanel(Spectrum spec)
  
  Specified by:
  
  siGetNewJSVPanel in interface ScriptInterface
- siGetNewJSVPanel2
  
  public JSVPanel siGetNewJSVPanel2(Lst<Spectrum> specs)
  
  Specified by:
  
  siGetNewJSVPanel2 in interface ScriptInterface
- siExecTest
  
  public void siExecTest(String value)
  
  Specified by:
  
  siExecTest in interface ScriptInterface
- siNewWindow
  
  public void siNewWindow(boolean isSelected, boolean fromFrame)
  
  Specified by:
  
  siNewWindow in interface ScriptInterface
- syncToJmol
  
  public void syncToJmol(String msg)
  
  Specified by:
  
  syncToJmol in interface JSVInterface
  
  Specified by:
  
  syncToJmol in interface ScriptInterface
- repaint
  
  public void repaint()
  
  Specified by:
  
  repaint in interface ScriptInterface
- setCursor
  
  public void setCursor(int id)
  
  Specified by:
  
  setCursor in interface ScriptInterface
- isSigned
  
  public boolean isSigned()
  
  Specified by:
  
  isSigned in interface ScriptInterface
- runScriptNow
  
  public boolean runScriptNow(String script)
  
  Specified by:
  
  runScriptNow in interface ScriptInterface
- writeStatus
  
  public void writeStatus(String msg)
  
  Specified by:
  
  writeStatus in interface ScriptInterface
- getDisplaySchemesProcessor
  
  public DisplaySchemesProcessor getDisplaySchemesProcessor(JSVInterface jmolOrAdvancedApplet)
- setApplicationProperties
  
  public void setApplicationProperties(boolean shouldApplySpectrumDisplaySettings)

Class JSpecView

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Details

defaultDisplaySchemeName

jmol

Constructor Details

JSpecView

Method Details

setMainFrame

main

runScript

setProperties

saveProperties

exitJSpecView

siOpenDataOrFile

siSetCurrentSource

siSetPropertiesFromPreferences

siProcessCommand

siSetSelectedPanel

siSendPanelChange

siSyncLoad

siValidateAndRepaint

siExecHidden

siLoaded

siExecScriptComplete

siExecSetCallback

siUpdateBoolean

siCheckCallbacks

siNodeSet

siSourceClosed

siSetLoaded

siUpdateRecentMenus

siSetMenuEnables

siGetNewJSVPanel

siGetNewJSVPanel2

siExecTest

siNewWindow

syncToJmol

repaint

setCursor

isSigned

runScriptNow

writeStatus

getDisplaySchemesProcessor

setApplicationProperties